Tullius Lab

A list of resources available from the Tullius Lab:

• ORChID (OH Radical Cleavage Intensity Database)

Database of experimentally determined hydroxyl radical cleavage patterns of naked DNA molecules.  Algorithm to predict the cleavage pattern of any DNA sequence.

• ORChID in the UCSC Genome Browser

ORChID values predicted for the human genome.  The data is viewable and available for download from the UCSC genome browser.

• Chai regions in the UCSC Genome Browser

Chai is a structure-informed evolutionary sequence constraint detection algorithm.  Chai-identified regions are available from the UCSC genome browser.